SeqMan NGen Tool name | SeqMan NGen |
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URL | http://www.dnastar.com/t-products-seqman-ngen.aspx |
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Important features | 1. It is used for SNP discovery, Sequence assembly, coverage evaluation and consensus annotation.
2. It has integration with Lasergene. |
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Citations | |
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Year of publication | Not available |
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Rank by usage frequency | 100 |
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Comments | |
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Function | Alignment/Mapping, De novo assembler, Reference assembler, Transcriptome assembler, SNP discovery, Indel discovery, Software package |
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Category | Paid, Downloadable |
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License | network license |
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Status | |
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Input file format | FASTA, FASTQ, Scarf, SFF, SQD, ACE, PHD, ABI, GFF, CSFasta/CSQUAL (ABI SOLiD), SCF, TXT, GBK, SEQ |
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Output file format | BAM, SAM, or ACE files. |
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Operating system | Mac OS X, Windows XP x64, Windows Vista x64,
Windows 7 x64 |
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Operating language | |
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Platform | Illumina/Solexa, Roche 454, ABI SOLiD, Helicos |
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Maintained by | |
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Downloadable file format | |
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Submission file format | |
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